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Exploration of the intercellular heterogeneity of topotecan uptake into human breast cancer cells through compartmental modelling

机译:通过区室模型探索拓扑替康摄入人乳腺癌细胞的细胞间异质性

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摘要

A mathematical multi-cell model for the in vitro kinetics of the anti-cancer agent topotecan (TPT) following administration into a culture medium containing a population of human breast cancer cells (MCF-7 cell line) is described. This non-linear compartmental model is an extension of an earlier single-cell type model and has been validated using experimental data obtained using two-photon laser scanning microscopy (TPLSM).\ud \udA structural identifiability analysis is performed prior to parameter estimation to test whether the unknown parameters within the model are uniquely determined by the model outputs. The full model has 43 compartments, with 107 unknown parameters, and it was found that the structural identifiability result could not be established even when using the latest version of the symbolic computation software MATHEMATICA. However, by assuming that a priori knowledge is available for certain parameters, it was possible to reduce the number of parameters to 81, and it was found that this (Stage Two) model was globally (uniquely) structurally identifiable. The identifiability analysis demonstrated how valuable symbolic computation is in this context, as the analysis is far too lengthy and difficult to be performed by hand. (C) 2008 Elsevier Inc. All rights reserved.\ud
机译:描述了在向含有人乳腺癌细胞群(MCF-7细胞系)的培养基中给药后抗癌药拓扑替康(TPT)的体外动力学的数学多细胞模型。该非线性区室模型是对较早的单细胞类型模型的扩展,并已通过使用双光子激光扫描显微镜(TPLSM)获得的实验数据进行了验证。\ ud \ ud在对参数进行估算之前,要进行结构识别分析测试模型中的未知参数是否由模型输出唯一地确定。完整的模型有43个隔室,带有107个未知参数,并且发现即使使用最新版本的符号计算软件MATHEMATICA,也无法确定结构的可识别性结果。但是,通过假设某些参数可以使用先验知识,可以将参数数量减少到81,并且发现该模型(第二阶段)在结构上是全局(唯一)可识别的。可识别性分析表明,在这种情况下,符号计算是多么有价值,因为该分析太长且难以手动执行。 (C)2008 Elsevier Inc.保留所有权利。\ ud

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